Volume 307

iTHEMS Weekly News Letter

Hot Topic

Faculty of Science 2023 Year in Review: Catherine Beauchemin

2024-06-12

Catherine Beauchemin(Deputy Program Director, iTHEMS) was interviewed by the Toronto Metropolitan University about her interdisciplinary research and its impact.

For a physics professor, Catherine Beauchemin certainly gets involved in biology research more than you might expect. Her embrace of interdisciplinarity has taken her to many places, currently to Japan, where she is serving as Deputy Program Director of the Interdisciplinary Theoretical and Mathematical Sciences (iTHEMS) programme at RIKEN, Japan's largest research institute. One of the best aspects? “My position allows me to host TMU trainees in Japan and expand their research and life horizons.”

Please see the related links for more details.

Upcoming Events

Seminar

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Quantum Computation SG Seminar

Quantum Computation Study Group Seminars

June 18 (Tue) at 13:30 - 15:00, 2024

Yuta Kikuchi (Research Scientist, Quantum algorithms and machine learning, Quantinuum K.K.)
Ermal Rrapaj (HPC Architecture and Performance Engineer, National Energy Research Scientific Computing Center (NERSC), Lawrence Berkeley National Laboratory (LBNL), USA)

Speaker:
Yuta Kikuchi

Title:
Simulating Floquet scrambling circuits on trapped-ion quantum computers

Abstract:
Complex quantum many-body dynamics spread initially localized quantum information across the entire system. Information scrambling refers to such a process, whose simulation is one of the promising applications of quantum computing. We demonstrate the Hayden-Preskill recovery protocol and the interferometric protocol for calculating out-of-time-ordered correlators to study the scrambling property of a one-dimensional kicked-Ising model on 20-qubit trapped-ion quantum processors. The simulated quantum circuits have a geometrically local structure that exhibits the ballistic growth of entanglement, resulting in the circuit depth being linear in the number of qubits for the entire state to be scrambled. We experimentally confirm the growth of signals in the Hayden-Preskill recovery protocol and the decay of out-of-time-ordered correlators at late times. As an application of the created scrambling circuits, we also experimentally demonstrate the calculation of the microcanonical expectation values of local operators adopting the idea of thermal pure quantum states.

Speaker:
Ermal Rrapaj

Title:
Exact block encoding of imaginary time evolution with universal quantum neural networks

Abstract:
Quantum computers have been widely speculated to offer significant advantages in obtaining the ground state of difficult Hamiltonian in chemistry and physics. The imaginary-time evolution method is a well-known approach used for obtaining the ground state in quantum many-body problems on a classical computer. In this work we develop a practical method for such purpose. We develop a constructive approach to generate quantum neural networks capable of representing the exact thermal states of all many-body qubit Hamiltonians. The Trotter expansion of the imaginary-time propagator is implemented through an exact block encoding by means of a unitary, restricted Boltzmann machine architecture. Marginalization over the hidden-layer neurons (auxiliary qubits) creates the non-unitary action on the visible layer. Then, we introduce a unitary deep Boltzmann machine architecture, in which the hidden-layer qubits are allowed to couple laterally to other hidden qubits. We prove that this wave function ansatz is closed under the action of the imaginary-time propagator and, more generally, can represent the action of a universal set of quantum gate operations. We provide analytic expressions for the coefficients for both architectures, thus enabling exact network representations of thermal states without stochastic optimization of the network parameters. In the limit of large imaginary time, the ansatz yields the ground state of the system. The number of qubits grows linearly with the system size and total imaginary time for a fixed interaction order. Both networks can be readily implemented on quantum hardware via mid-circuit measurements of auxiliary qubits. If only one auxiliary qubit is measured and reset, the circuit depth scales linearly with imaginary time and system size, while the width is constant. Alternatively, one can employ a number of auxiliary qubits linearly proportional to the system size, and circuit depth grows linearly with imaginary time only.

Venue: Hybrid Format (3F #359 and Zoom), Seminar Room #359, 3F Main Research Building, RIKEN

Event Official Language: English

Seminar

iTHEMS Biology Seminar

Finding and understanding disease-causing genetic mutations

June 20 (Thu) at 16:00 - 17:00, 2024

Kojima Shohei (Special Postdoctoral Researcher, Genome Immunobiology RIKEN Hakubi Research Team, RIKEN Center for Integrative Medical Sciences (IMS))

Disease is caused by genetic factors and environmental factors. Genome-wide association study (GWAS) is a powerful method to find genetic factors associated with disease and human complex traits. One conceptual finding GWAS revealed is that many common diseases are caused by a combination of multiple genetic factors (polygenic), rather than a single causal mutation (monogenic). I have been working on finding genetic factors causing polygenic diseases by developing software that accurately finds sequence insertions and deletions from human population-scale sequencing datasets. In this talk, first, I will introduce some examples of disease-causing variants we recently discovered. Next I will also introduce my current research theme aiming to untangle how multiple genetic factors coordinately change cellular homeostasis, which I would like to have a collaboration with mathematical scientists.

Venue: Hybrid Format (3F #359 and Zoom), Main Research Building, RIKEN

Event Official Language: English

Lecture

Rigidity and Flexibility of Isometric Embeddings

June 20 (Thu) at 17:00 - 18:30, 2024

Dominik Inauen (Academic Staff, University of Leipzig, Germany)

The problem of embedding abstract Riemannian manifolds isometrically (i.e. preserving the lengths) into Euclidean space stems from the conceptually fundamental question of whether abstract Riemannian manifolds and submanifolds of Euclidean space are the same. As it turns out, such embeddings have a drastically different behaviour at low regularity (i.e. C^1) than at high regularity (i.e. C^2). For example, by the famous Nash--Kuiper theorem it is possible to find C1 isometric embeddings of the standard 2-sphere into arbitrarily small balls in R^3, and yet, in the C^2 category there is (up to translation and rotation) just one isometric embedding, namely the standard inclusion. Analoguous to the Onsager conjecture in fluid dynamics, one might ask if there is a sharp regularity threshold in the Holder scale which distinguishes these flexible and rigid behaviours. In my talk I will review some known results and argue why the Holder exponent 1/2 can be seen as a critical exponent in the problem.

Venue: Graduate School of Mathematical Sciences, The University of Tokyo

Event Official Language: English

Seminar

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iTHEMS Theoretical Physics Seminar

Magnonic spin current and shot noise in an itinerant Fermi gas

June 25 (Tue) at 13:30 - 15:00, 2024

Tingyu Zhang (Ph.D. Student, Department of Physics, Graduate School of Science, The University of Tokyo)

Spin transport phenomena at strongly-correlated interfaces play central roles in fundamental physics as well as spintronic applications. Although the spin-flip tunneling process, a key mechanism of spin transport, has been extensively studied in solid-state systems, its behavior in itinerant Fermi gases remains elusive.
In this regard we study the spin tunneling in a repulsively interacting ultracold Fermi gas based on the conventional quasiparticle tunneling process. we investigate the spin current induced by quasiparticle and spin-flip tunneling processes to see their bias dependence and interaction dependence. To anatomize spin carriers, we propose the detection of the spin current noise in the system. The Fano factor, which is defined as the ratio between the spin current and its noise can serve as a probe of elementary carriers of spin transport. The change of the Fano factor microscopically evinces a crossover from the quasiparticle transport to magnon transport in itinerant fermionic systems.

Venue: Hybrid Format (3F #359 and Zoom), Seminar Room #359, 3F Main Research Building, RIKEN

Event Official Language: English

Seminar

DEEP-IN Seminar

Inferring collective behavior from social interactions to population coding

June 27 (Thu) at 16:00 - 17:30, 2024

Chen Xiaowen (Postdoctoral Researcher, Laboratoire de Physique de l’École normale supérieure, CNRS, France)

(This is a joint iTHEMS Biology Seminar)
From social animals to neuronal networks, collective behavior is ubiquitous in living systems. How are these behaviors encoded in interactions, and how do they drive biological functions? Recent insights from statistical physics applied to biological data have offer exciting new perspectives. However, previous research has mostly focused on the statics, i.e. the steady-state distributions of the collective behavior, without taking into consideration of time. In this talk, I will present two recent progresses tapping into the temporal domain. First, I will present a study of collective behavior in social mice from their co-localization patterns. To capture both static and dynamic features of the data, we developed a novel inference method termed the generalized Glauber dynamics (GGD) that can tune the dynamics while keeping the steady state distribution fixed. I will first outline the explanation power of the GGD dynamics, then explain how to infer the dynamics from data. The inferred interactions characterize sociability for different mice strains. In the second example, we studied information flow among neurons in the larval zebrafish hindbrain. By adapting the method of Granger causality to single cell calcium transient data, we were able to detect both a global information flow among neurons, as well as identifying brain regions that are key in locomotion.

Reference

  1. Xiaowen Chen, Maciej Winiarski, Alicja Puścian, Ewelina Knapska, Aleksandra M. Walczak, and Thierry Mora, Generalized Glauber Dynamics for Inference in Biology, Phys. Rev. X 13, 041053 (2023), doi: 10.1103/PhysRevX.13.041053

Venue: via Zoom

Event Official Language: English

Seminar

ABBL-iTHEMS Joint Astro Seminar

Challenging conventional wisdom in binary evolution

June 28 (Fri) at 14:00 - 15:15, 2024

Ryosuke Hirai (Special Postdoctoral Researcher, Astrophysical Big Bang Laboratory, RIKEN Cluster for Pioneering Research (CPR))

The majority of massive stars, stars with more than 8 times the mass of the Sun, are known to be born in binary or higher-order multiple systems. During the course of their evolution, the stars can interact in many different ways and cause interesting astrophysical phenomena such as eruptions and explosions or create objects like X-ray binaries, gravitational wave sources, etc. Many studies have been conducted over the last few decades to tie our latest models to these observables in order to refine our understanding of massive binary evolution. However, in some cases "refining" a model is not enough and a paradigm shift is required to explain all the observables in a coherent way. In this talk, I will introduce some topics from my past work where I challenge conventional wisdom to resolve long-standing problems. The topics are as follows: 1. impact of supernova ejecta on companion star evolution, 2. wind accretion onto black holes, 3. common-envelope evolution, 4. neutron star kicks. I will also discuss how these new views impact the overall landscape of binary evolution theory.

Venue: via Zoom

Event Official Language: English

Seminar

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iTHEMS Theoretical Physics Seminar

Worldline Path Integrals for the Graviton and 1-Loop Divergences in Quantum Gravity

June 28 (Fri) at 16:00 - 17:20, 2024

Fiorenzo Bastianelli (Professor, University of Bologna, Italy)

In this talk, I will discuss perturbative quantum gravity at the 1-loop level by reviewing and systematizing old results on UV divergences and presenting new findings along with new methods for their calculation. The traditional approach to this problem employs the Schwinger-DeWitt heat kernel method. We extend this approach by incorporating worldline path integrals to compute the perturbative expansion at small proper time. In addition, we explore a more principled approach that utilizes the BRST path integral quantization of the N=4 spinning particle, which describes the graviton in first quantization. Using these methods, we calculate the one-loop divergences in quantum gravity with a cosmological constant in arbitrary dimensions. When evaluated on-shell, these calculations yield a set of gauge-invariant coefficients that characterize pure quantum gravity with a cosmological constant. These coefficients may serve as benchmarks for comparing various approaches to quantum gravity.

Venue: Seminar Room #359, 3F Main Research Building, RIKEN / via Zoom

Event Official Language: English

Seminar

ABBL-iTHEMS Joint Astro Seminar

Dynamics of the very early universe: towards decoding its signature through primordial black hole abundance, dark matter, and gravitational waves.

July 5 (Fri) at 14:00 - 15:15, 2024

Riajul Haque (Postdoctoral Researcher, Department of Physics, Indian Institute of Technology, India)

I will start my talk with a brief overview of the standard reheating scenario. Then, I will discuss reheating through the evaporation of primordial black holes (PBHs) if one assumes PBHs are formed during the phase of reheating. Depending on their initial mass, abundance, and inflaton coupling with the radiation, I discuss two physically distinct possibilities of reheating the universe. In one possibility, the thermal bath is solely obtained from the decay of PBHs, while inflaton plays the role of the dominant energy component in the entire process. In the other possibility, PBHs dominate the total energy budget of the universe during evolution, and then their subsequent evaporation leads to a radiation-dominated universe. Furthermore, I will discuss the impact of both monochromatic and extended PBH mass functions and estimate the detailed parameter ranges for which those distinct reheating histories are realized. The evaporation of PBHs is also responsible for the production of DM. I will show its parameters in the background of reheating obtained from two chief systems in the early universe: the inflaton and the primordial black holes (PBHs). Then, I will move my discussion towards stable PBHs and discuss the effects of the parameters describing the epoch of reheating on the abundance of PBHs and the fraction of cold dark matter that can be composed of PBHs. If PBHs are produced due to the enhancement of the primordial scalar power spectrum on small scales, such primordial spectra also inevitably lead to strong amplification of the scalar-induced secondary gravitational waves (GWs) at higher frequencies. I will show how the recent detection of the stochastic gravitational wave background (SGWB) by the pulsar timing arrays (PTAs) has opened up the possibility of directly probing the very early universe through the scalar-induced secondary gravitational waves. Finally, I will conclude my talk by elaborating on the effect of quantum correction on the Hawking radiation for ultra-light PBHs and its observational signature through dark matter and gravitational waves.

Reference

  1. JHEP 09 (2023) 012; Phys.Rev.D 108 (2023) 6, 063523; Phys.Rev.D 109 (2024) 2, 023521; e-Print: 2403.16963; e-Print: 2404.16815.

Venue: via Zoom

Event Official Language: English

Colloquium

The 26th MACS Colloquium thumbnail

MACS ColloquiumSupported by iTHEMS

The 26th MACS Colloquium

July 8 (Mon) at 14:45 - 18:00, 2024

Satoshi Taguchi (Professor, Division of Earth and Planetary Sciences, Graduate School of Science, Kyoto University)
Michitaka Notaguchi (Professor, Division of Biological Sciences, Graduate School of Science, Kyoto University)

14:45-15:00 Teatime discussion
15:00-16:00 Talk by Prof. Satoshi Taguchi (Professor, Division of Earth and Planetary Sciences, Graduate School of Science, Kyoto University)
16:15-17:15 Talk by Prof. Yoshihiro Morishita (Professor, Division of Biological Sciences, Graduate School of Science, Kyoto University)
17:15-18:00 Discussion

Venue: Science Seminar House (Map 9)

Event Official Language: Japanese

Seminar

iTHEMS Biology Seminar

The role of demographic stochasticity in the evolution of spite and altruism

July 9 (Tue) at 16:00 - 17:00, 2024

Troy Day (Professor, Head of Department, Department of Mathematics and Statistics, Queen's University, Canada)

The evolution of spiteful and altruistic behaviour remains a fascinating and somewhat puzzling phenomenon. In recent years there has been interest in examining how stochasticity arising from a finite population size might affect the evolution of these traits. Some results suggest that such stochasticity can reverse the direction of selection and promote the evolution of traits like altruism and spitefulness that are selected against in very large (deterministic) populations. However, other results seem to call this finding into question. In this talk I will consider a simple but quite general model of spite and of altruistic behaviour and examine how demographic stochasticity affects the evolution of these traits. I will show that stochasticity can indeed affect the direction of evolution but not in the way that previous studies have suggested. The results also help to clarify the broader issue of how and why stochasticity can sometimes reverse the direction of evolution.

Venue: Hybrid Format (3F #359 and Zoom), Seminar Room #359, 3F Main Research Building, RIKEN

Event Official Language: English

Seminar

iTHEMS Biology Seminar

Multi-Agent Reinforcement Learning for Exploring Collective Behavior

July 25 (Thu) at 16:00 - 17:00, 2024

Kazushi Tsutsui (Assistant Professor, Graduate School of Arts and Sciences, The University of Tokyo)

Humans and other organisms develop collective behaviors through interactions with diverse environments and various species. These behaviors are significant topics across multiple research fields, including evolutionary biology, behavioral ecology, and animal sociology. Unraveling the decision-making mechanisms of individuals in groups within cooperative and competitive contexts has captured the attention of many researchers but remains a complex challenge. This seminar will present research cases that employ multi-agent reinforcement learning, a machine learning technique, to investigate the decision-making processes underlying collective behavior. Through this approach, we aim to provide deeper insights into the dynamics and mechanisms that drive group behaviors in various biological systems.

Reference

  1. Kazushi Tsutsui, Ryoya Tanaka, Kazuya Takeda, and Keisuke Fujii, Collaborative hunting in artificial agents with deep reinforcement learning, eLife 13, e85694 (2024), doi: 10.7554/eLife.85694

Venue: Hybrid Format (3F #359 and Zoom), Seminar Room #359, 3F Main Research Building, RIKEN

Event Official Language: English

Others

What will Happen to iTHEMS⊗Masason Foundation Members?

August 2 (Fri) at 13:30 - 17:30, 2024

Venue: Seminar Room #359, 3F Main Research Building, RIKEN

Event Official Language: English

Paper of the Week

Week 3, June 2024

2024-06-13

Title: Geometry of Carrollian Stretched Horizons
Author: Laurent Freidel, Puttarak Jai-akson
arXiv: http://arxiv.org/abs/2406.06709v1

Title: Learning QM/MM potential using equivariant multiscale model
Author: Yao-Kun Lei, Kiyoshi Yagi, Yuji Sugita
Journal Reference: J. Chem. Phys. 160, 214109 (2024)
doi: https://doi.org/10.1063/5.0205123

Title: Power-law correlation in the homogeneous disordered state of anisotropically self-propelled systems
Author: Kyosuke Adachi, Hiroyoshi Nakano
arXiv: http://arxiv.org/abs/2406.06138v1

Title: Hawking-Page and entanglement phase transition in 2d CFT on curved backgrounds
Author: Akihiro Miyata, Masahiro Nozaki, Kotaro Tamaoka, Masataka Watanabe
arXiv: http://arxiv.org/abs/2406.06121v1

Title: Anomaly inflow for dipole symmetry and higher form foliated field theories
Author: Hiromi Ebisu, Masazumi Honda, Taiichi Nakanishi
arXiv: http://arxiv.org/abs/2406.04919v1

Title: (In)stability of the black hole greybody factors and ringdowns against a small-bump correction
Author: Naritaka Oshita, Kazufumi Takahashi, Shinji Mukohyama
arXiv: http://arxiv.org/abs/2406.04525v1

Title: $_Ξ^{5}H $ hypernuclei by folding the state-of-the-art $ ΞN $ interactions
Author: Faisal Etminan
arXiv: http://arxiv.org/abs/2406.03572v1

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